4-Genetics-Algorithms-Sequence Alignment

BLAST algorithm

Basic Local Alignment Search Tool {BLAST algorithm} searches sequence databases for similar sequences.

ClustalW

Algorithms {ClustalW algorithm} can align multiple sequences.

Comparative Sequencing Analysis

Nucleotide or amino-acid sequences can align {Comparative Sequencing Analysis} (CSA).

FASTA

Algorithms {FASTA algorithm} can search sequence databases for similar sequences.

MSA2.1 algorithm

Algorithms {MSA2.1 algorithm} can align multiple sequences.

Smith-Waterman algorithm

Nucleotide and amino-acid sequences can align using algorithms {Smith-Waterman algorithm} {Gotoh-Smith-Waterman algorithm} or filtering algorithms {Chang-Marr algorithm} {Filtered Smith-Waterman algorithm}.

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Date Modified: 2022.0225